Motif View

Internal ID 1761265
Source Database TransTermHP TERM 1038
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1038
Sequence CGCGGCACCGACCGGTGCCGCG
Look for more occurrences
Start 3291514
End 3291535
Strand -
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCGCAAAACGAAAA(5' tail) CGCGGCACC(5' stem) GGTC(loop) GGTGCCGCG(3' stem) TCGGGGCATGCGGCG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685