Motif View

Internal ID 1761242
Source Database TransTermHP TERM 990
Feature Type terminator
Name
Rho-independent transcription terminator TERM 990
Sequence GAGCCGCATCGACGATGCGGCTC
Look for more occurrences
Start 3136843
End 3136865
Strand -
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACCCGCAAAGCAAAA(5' tail) GAGCCGCATC(5' stem) GTC(loop) GATGCGGCTC(3' stem) TTTCCATTTGGCCTT(3' tail). Confidence: 100. opp_overlap 3136843

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685