Motif View

Internal ID 1761240
Source Database TransTermHP TERM 986
Feature Type terminator
Name
Rho-independent transcription terminator TERM 986
Sequence GGGGGCGAGCGATCGCCCCC
Look for more occurrences
Start 3120602
End 3120621
Strand -
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCGGGCCGAAAAAAA(5' tail) GGGGGCGA(5' stem) TCGC(loop) TCGCCCCC(3' stem) CTCGTTCCTGCGTCC(3' tail). Confidence: 100. opp_overlap 3120601 3120598

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685