Motif View

Internal ID 1761229
Source Database TransTermHP TERM 971
Feature Type terminator
Name
Rho-independent transcription terminator TERM 971
Sequence GGCCTGATCGCAAGATCGGGCC
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Start 3091931
End 3091952
Strand -
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCGGAAAAACAAAAA(5' tail) GGCCCGATC(5' stem) TTGC(loop) GATCAGGCC(3' stem) TTTCGAATTCCGTTG(3' tail). Confidence: 100. opp_overlap 3091931

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685