Motif View

Internal ID 1761222
Source Database TransTermHP TERM 964
Feature Type terminator
Name
Rho-independent transcription terminator TERM 964
Sequence GACGGCCCGCGGGCCGTC
Look for more occurrences
Start 3069393
End 3069410
Strand +
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCAAACGGACACCAG(5' tail) GACGGCC(5' stem) CGCG(loop) GGCCGTC(3' stem) TTTTTTTCGCCCCGC(3' tail). Confidence: 100. opp_overlap 3069383 3069392, overlap 3069353

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685