Motif View

Internal ID 1761157
Source Database TransTermHP TERM 883
Feature Type terminator
Name
Rho-independent transcription terminator TERM 883
Sequence GCGAGCCCTTGGCTCGC
Look for more occurrences
Start 2848594
End 2848610
Strand +
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CAGCACAACGAAAAA(5' tail) GCGAGCC(5' stem) CTT(loop) GGCTCGC(3' stem) TTTTTTTATCCCGCG(3' tail). Confidence: 100. opp_overlap 2848594 2848588

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685