Motif View

Internal ID 1761155
Source Database TransTermHP TERM 881
Feature Type terminator
Name
Rho-independent transcription terminator TERM 881
Sequence TGGCCTGACCGGCATCTGCCGGCCGGGCCA
Look for more occurrences
Start 2841610
End 2841639
Strand -
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCGTCGAAAGAAAAA(5' tail) TGGCCCGGCCGGC(5' stem) AGAT(loop) GCCGGTCAGGCCA(3' stem) TGTTCATGAGCGGGG(3' tail). Confidence: 100. opp_overlap 2841608 2841610

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685