Motif View

Internal ID 1761139
Source Database TransTermHP TERM 863
Feature Type terminator
Name
Rho-independent transcription terminator TERM 863
Sequence GCCGCATGGTCACGAACCATGCGGC
Look for more occurrences
Start 2799241
End 2799265
Strand +
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCGGGCAAACAAAAA(5' tail) GCCGCATGGT(5' stem) CACGA(loop) ACCATGCGGC(3' stem) TTTTTTTGCGAGCAT(3' tail). Confidence: 100. opp_overlap 2799241

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685