| Internal ID | 1761135 | Source Database | TransTermHP TERM 857 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 857
|
| Sequence |
CGCGCACCGGCAAAGGGACGCGTCGCCGCGTCCCTTTTTCGTTGTGCG Look for more occurrences |
| Start | 2780394 |
| End | 2780441 |
| Strand | - |
| Genomic Context | |
| Replicon | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | AAACGCTGAACGGAA(5' tail) CGCACAACGAAAAAGGGACGCG(5' stem) GCGA(loop) CGCGTCCCTTTGCCGGTGCGCG(3' stem) GCAGCCCGCGCGGGC(3' tail). Confidence: 100. opp_overlap 2780408, overlap 2780382 2780401 2780408 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685
|