Motif View

Internal ID 1761112
Source Database TransTermHP TERM 826
Feature Type terminator
Name
Rho-independent transcription terminator TERM 826
Sequence CGGGCGGCCTGGCCGCCCG
Look for more occurrences
Start 2710267
End 2710285
Strand -
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCGCGCCAAACGAAA(5' tail) CGGGCGGC(5' stem) CAG(loop) GCCGCCCG(3' stem) TCGTTTCATTTGCCC(3' tail). Confidence: 100. opp_overlap 2710267 2710264

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685