Motif View

Internal ID 1761080
Source Database TransTermHP TERM 777
Feature Type terminator
Name
Rho-independent transcription terminator TERM 777
Sequence CGGCGATGCTCGTGCGAGCGTCGCCG
Look for more occurrences
Start 2566488
End 2566513
Strand +
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GAGGACCATAAAAAA(5' tail) CGGCGATGCTC(5' stem) GTGC(loop) GAGCGTCGCCG(3' stem) TTTTCACATCCACTC(3' tail). Confidence: 95. opp_overlap 2566488

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685