Motif View

Internal ID 1761049
Source Database TransTermHP TERM 727
Feature Type terminator
Name
Rho-independent transcription terminator TERM 727
Sequence GGGCGCCTTCGGGCGCCC
Look for more occurrences
Start 2421220
End 2421237
Strand +
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGCCCGCCTCGCACA(5' tail) GGGCGCC(5' stem) TTCG(loop) GGCGCCC(3' stem) TTTTTCATGCGCGCC(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685