Motif View

Internal ID 1761048
Source Database TransTermHP TERM 726
Feature Type terminator
Name
Rho-independent transcription terminator TERM 726
Sequence CCGGCCGCGTGATGCGGCGCGGCCGG
Look for more occurrences
Start 2418576
End 2418601
Strand -
Genomic Context Located within gene [BCEN_RS10920]
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGCTTCGCGACGAAA(5' tail) CCGGCCGCGC(5' stem) CGCATC(loop) ACGCGGCCGG(3' stem) GCCTCCCATCGCGGT(3' tail). Confidence: 90. opp_overlap 2418590

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685