Motif View

Internal ID 1761034
Source Database TransTermHP TERM 704
Feature Type terminator
Name
Rho-independent transcription terminator TERM 704
Sequence GACCGGCGCGGCCCCAAGGGCCGCGCGGGCC
Look for more occurrences
Start 2371893
End 2371923
Strand +
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCGCGATGAATTCAT(5' tail) GACCGGCGCGGCCC(5' stem) CAA(loop) GGGCCGCGCGGGCC(3' stem) TTCGTTCCCGTCTTG(3' tail). Confidence: 100. opp_overlap 2371892 2371888

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685