Motif View

Internal ID 1761022
Source Database TransTermHP TERM 685
Feature Type terminator
Name
Rho-independent transcription terminator TERM 685
Sequence GCGCGCGGCGTTCGCTGCCGCGCGC
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Start 2285362
End 2285386
Strand +
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCGGTTTGAACGAA(5' tail) GCGCGCGGCG(5' stem) TTCGC(loop) TGCCGCGCGC(3' stem) TTTACTCCCCTCCTT(3' tail). Confidence: 91. opp_overlap 2285362

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685