Motif View

Internal ID 1761012
Source Database TransTermHP TERM 675
Feature Type terminator
Name
Rho-independent transcription terminator TERM 675
Sequence TCGCGCGCGTGGCGCGCGA
Look for more occurrences
Start 2252786
End 2252804
Strand -
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TGCAATGCAGCAAAA(5' tail) TCGCGCGC(5' stem) CAC(loop) GCGCGCGA(3' stem) CCGGGCGGCTCAGTC(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685