Motif View

Internal ID 1760781
Source Database TransTermHP TERM 342
Feature Type terminator
Name
Rho-independent transcription terminator TERM 342
Sequence CGCGCCGCCACGAGCGGCGCG
Look for more occurrences
Start 1071152
End 1071172
Strand -
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCGACCGACGCAAAA(5' tail) CGCGCCGC(5' stem) TCGTG(loop) GCGGCGCG(3' stem) TTCCGGCAGGTTACA(3' tail). Confidence: 95. opp_overlap 1071141

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685