Internal ID | 1760473 | Source Database | TransTermHP TERM 28 |
Feature Type | terminator |
Name |
Rho-independent transcription terminator TERM 28
|
Sequence |
CACCCCGGAGGTCGGATCTCGATCCGGCCTCCGGGGTG Look for more occurrences |
Start | 238881 |
End | 238918 |
Strand | - |
Genomic Context | |
Replicon | Burkholderia ambifaria AMMD chromosome 3, complete sequence. |
Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
Additional Comments | ATGGCGTCAAGAAAA(5' tail) CACCCCGGAGGCCGGAT(5' stem) CGAG(loop) ATCCGACCTCCGGGGTG(3' stem) CGGTGCCAAACCTGC(3' tail). Confidence: 100. opp_overlap 238911 |
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685
|