Motif View

Internal ID 1751264
Source Database TransTermHP TERM 588
Feature Type terminator
Name
Rho-independent transcription terminator TERM 588
Sequence CGAGCGCCGCCGCTGGCCGGCGGCGCCCG
Look for more occurrences
Start 2922513
End 2922541
Strand +
Genomic Context
Replicon Burkholderia sp. 383, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CACGGTGTAACGCGG(5' tail) CGAGCGCCGCCG(5' stem) CTGGC(loop) CGGCGGCGCCCG(3' stem) TTCGTGAACGAAGCT(3' tail). Confidence: 93. opp_overlap 2922477

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685