| Internal ID | 1586734 | Source Database | TransTermHP TERM 3 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 3
|
| Sequence |
AAAAAGGGCGGGAATCCGACGATTCCCGCCCTTTTG Look for more occurrences |
| Start | 12882 |
| End | 12917 |
| Strand | + |
| Genomic Context | |
| Replicon | Burkholderia cenocepacia K56-2Valvano ctg7180000002942, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | TCCGGCCGCACAAAG(5' tail) AAAAAGGGCGGGAATC(5' stem) CGAC(loop) GATTCCCGCCCTTTTG(3' stem) TATTTCGGCGCGGCC(3' tail). Confidence: 93. opp_overlap 12887, overlap 12887 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685
|