Internal ID | 1586733 | Source Database | TransTermHP TERM 1 |
Feature Type | terminator |
Name |
Rho-independent transcription terminator TERM 1
|
Sequence |
CCGCCGGCCGGCTGGACATCGCAACGTCCGCCCGTCGGCGG Look for more occurrences |
Start | 8528 |
End | 8568 |
Strand | + |
Genomic Context | |
Replicon | Burkholderia cenocepacia K56-2Valvano ctg7180000002942, whole genome shotgun sequence. |
Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
Additional Comments | CGCTTACACTAGGGG(5' tail) CCGCCGGCCGGCTGGACAT(5' stem) CGCA(loop) ACGTCC-GCCCGTCGGCGG(3' stem) TTTTCTTTTGTTGAC(3' tail). Confidence: 100. gap 1 |
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685
|