| Internal ID | 1585691 | Source Database | TransTermHP TERM 12 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 12
|
| Sequence |
CGTCGCGGGCTGGCGGGCGCTCGCCGCTACGCCGCGACCACCCGCCAGCCCGCGACCAA Look for more occurrences |
| Start | 79834 |
| End | 79892 |
| Strand | - |
| Genomic Context | |
| Replicon | Burkholderia cenocepacia K56-2Valvano ctg7180000002935, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | AAACTGGATAACGCA(5' tail) TTGGTCGCGGGCTGGCGGGTGGTCGCGGC(5' stem) GTA(loop) GCGGCGAGCGCCCGCCAGCCCGCGACG--(3' stem) CCGCGCAAAAAATCC(3' tail). Confidence: 100. gap 2, overlap 79830 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685
|