Burkholderia cenocepacia J2315 Functional Domain Annotations

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IMP: This is a list of Burkholderia functional domain predictions made using the InterProScan software package.

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Locus Tag Product External DB External Signature Accession Signature Description InterPro Accession AA Start AA Stop Score InterPro Annotation Version
BCAM2129 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase SUPERFAMILY SSF51556 IPR032466 4 333 5.03E-80 Metal-dependent hydrolase 5.36-75.0
BCAM2129 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase Pfam PF04909 Amidohydrolase IPR006680 5 332 2.4E-46 Amidohydrolase-related 5.36-75.0
BCAL2927 16S rRNA-processing protein RimM Gene3D G3DSA:2.30.30.240 143 226 7.4E-27 5.36-75.0
BCAL2927 16S rRNA-processing protein RimM Hamap MF_00014 Ribosome maturation factor RimM [rimM]. IPR011961 52 226 22.332 16S rRNA processing protein RimM 5.36-75.0
BCAL2927 16S rRNA-processing protein RimM SUPERFAMILY SSF50447 IPR009000 51 141 8.12E-16 Translation protein, beta-barrel domain superfamily 5.36-75.0
BCAL2927 16S rRNA-processing protein RimM Pfam PF01782 RimM N-terminal domain IPR002676 54 139 1.0E-22 RimM, N-terminal 5.36-75.0
BCAL2927 16S rRNA-processing protein RimM Gene3D G3DSA:2.40.30.60 IPR036976 43 142 1.0E-25 RimM, N-terminal domain superfamily 5.36-75.0
BCAL2927 16S rRNA-processing protein RimM TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM IPR011961 53 225 2.2E-38 16S rRNA processing protein RimM 5.36-75.0
BCAL2927 16S rRNA-processing protein RimM SUPERFAMILY SSF50346 IPR011033 148 225 4.12E-17 PRC-barrel-like superfamily 5.36-75.0
BCAL2927 16S rRNA-processing protein RimM Pfam PF05239 PRC-barrel domain IPR027275 146 221 1.5E-8 PRC-barrel domain 5.36-75.0
BCAL0025 16S rRNA methyltransferase GidB CDD AdoMet_MTases 84 184 1.24586E-10 5.36-75.0
BCAL0025 16S rRNA methyltransferase GidB Pfam PF02527 rRNA small subunit methyltransferase G IPR003682 34 219 1.4E-50 rRNA small subunit methyltransferase G 5.36-75.0
BCAL0025 16S rRNA methyltransferase GidB Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. IPR003682 26 221 26.755 rRNA small subunit methyltransferase G 5.36-75.0
BCAL0025 16S rRNA methyltransferase GidB TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG IPR003682 38 221 5.2E-47 rRNA small subunit methyltransferase G 5.36-75.0
BCAL0025 16S rRNA methyltransferase GidB SUPERFAMILY SSF53335 IPR029063 15 222 4.18E-44 S-adenosyl-L-methionine-dependent methyltransferase 5.36-75.0
BCAL0025 16S rRNA methyltransferase GidB Gene3D G3DSA:3.40.50.150 4 227 3.4E-68 5.36-75.0
BCAL0025 16S rRNA methyltransferase GidB PIRSF PIRSF003078 IPR003682 14 226 6.3E-55 rRNA small subunit methyltransferase G 5.36-75.0
BCAL3392 16S ribosomal RNA methyltransferase RsmE Gene3D G3DSA:2.40.240.20 1 66 2.0E-20 5.36-75.0
BCAL3392 16S ribosomal RNA methyltransferase RsmE SUPERFAMILY SSF88697 IPR015947 1 67 2.15E-15 PUA-like superfamily 5.36-75.0
BCAL3392 16S ribosomal RNA methyltransferase RsmE CDD RsmE-like 77 230 2.32962E-57 5.36-75.0