Burkholderia cenocepacia J2315, BCAM2051 (bcscJ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAM2051
NCBI Locus TagQU43_RS64615
Name
bcscJ
Replicon chromosome 2
Genomic location 2282479 - 2283363 (- strand)

Cross-References

RefSeq WP_012493471.1
GI 206563892
Entrez 6930385
GI 206563892
INSDC CAR55910.1
NCBI Locus Tag QU43_RS64615
NCBI Old Locus Tag BCAM2051
RefSeq WP_012493471.1,GeneID
UniParc UPI0000005459
UniProtKB Acc B4EN94
UniProtKB ID B4EN94_BURCJ
UniRef100 UniRef100_Q8VP18
UniRef50 UniRef50_A9AP17
UniRef90 UniRef90_A9AP17

Product

Feature Type CDS
Coding Frame 1
Product Name
type III secretion system protein
Synonyms
Evidence for Translation
Charge (pH 7) 3.41
Kyte-Doolittle Hydrophobicity Value 0.064
Molecular Weight (kDa) 30888.9
Isoelectric Point (pI) 9.05

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
T3SS
Note: This is based on PSORTb V3.0 secondary localization prediction
Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 163 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG003799 (574 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAM2051
Search term: bcscJ

References

A putative type III secretion gene cluster is widely distributed in the Burkholderia cepacia complex but absent from genomovar I.
Parsons YN, Glendinning KJ, Thornton V, Hales BA, Hart CA, Winstanley C
FEMS Microbiol Lett 2001 Sep 11;203(1):103-8
PubMed ID: 11557147
Sequence divergence in type III secretion gene clusters of the Burkholderia cepacia complex.
Glendinning KJ, Parsons YN, Duangsonk K, Hales BA, Humphreys D, Hart CA, Winstanley C
FEMS Microbiol Lett 2004 Jun 15;235(2):229-35
PubMed ID: 15183868