Burkholderia cenocepacia J2315, BCAM0450 (copD)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAM0450
NCBI Locus Tag	QU43_RS56645
Name	copD
Replicon	chromosome 2
Genomic location	503839 - 504780 (+ strand)

Cross-References

RefSeq	WP_006484580.1
GI	206562313
Entrez	6928227
GI	206562313
INSDC	CAR54308.1
NCBI Locus Tag	QU43_RS56645
NCBI Old Locus Tag	BCAM0450
RefSeq	WP_006484580.1,GeneID
UniParc	UPI00017B9CBA
UniProtKB Acc	B4EJH3
UniProtKB ID	B4EJH3_BURCJ
UniRef100	UniRef100_A0A0D1DPS7
UniRef50	UniRef50_A9AU75
UniRef90	UniRef90_A0A095GG12

Product

Feature Type	CDS
Coding Frame	1
Product Name	CopD Product Name Confidence: Class 2
Synonyms
Evidence for Translation
Charge (pH 7)	10.54
Kyte-Doolittle Hydrophobicity Value	0.934
Molecular Weight (kDa)	32530.3
Isoelectric Point (pI)	10.71

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 15 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG004581 (572 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAM0450 Search term: copD Search term: CopD

Human Homologs

References

Copper resistance genes of Burkholderia cenocepacia H111 identified by transposon sequencing. Higgins S, Gualdi S, Pinto-Carbó M, Eberl L Environ Microbiol Rep 2020 Apr;12(2):241-249 PubMed ID: 32090500