Burkholderia cenocepacia J2315, BCAL2940

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAL2940
NCBI Locus TagQU43_RS51345
Name
Replicon chromosome 1
Genomic location 3218269 - 3219192 (- strand)

Cross-References

RefSeq WP_006486840.1
GI 206561275
Entrez 6932888
GI 206561275
INSDC CAR53240.1
NCBI Locus Tag QU43_RS51345
NCBI Old Locus Tag BCAL2940
RefSeq WP_006486840.1,GeneID
UniParc UPI00017B96F9
UniProtKB Acc B4EB30
UniProtKB ID B4EB30_BURCJ
UniRef100 UniRef100_A0A095DQA7
UniRef50 UniRef50_Q2SY14
UniRef90 UniRef90_A9ADU4

Product

Feature Type CDS
Coding Frame 1
Product Name
putative histone deacetylase-family protein
Synonyms
Evidence for Translation
Charge (pH 7) -11.09
Kyte-Doolittle Hydrophobicity Value 0.022
Molecular Weight (kDa) 33789.1
Isoelectric Point (pI) 5.76

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 443 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000899 (654 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL2940

Human Homologs

Ensembl 97, assembly GRCh38.p12
histone deacetylase 10 [Source:HGNC Symbol;Acc:HGNC:18128]
E-value: 2.6e-39
Percent Identity: 36.0

References

No references are associated with this feature.