Burkholderia pseudomallei K96243, BPSS2093 (TssI-6)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSS2093
Name
TssI-6
Replicon chromosome 2
Genomic location 2831227 - 2833431 (- strand)

Cross-References

RefSeq YP_112092.1
GI 53723107
Entrez 3095598
GI 53723107
INSDC CAH39573.1
NCBI Locus Tag BPSS2093
RefSeq YP_112092.1,GeneID
UniParc UPI000043BF43
UniProtKB Acc Q63II0
UniProtKB ID Q63II0_BURPS
UniRef100 UniRef100_A0A069BFI4
UniRef50 UniRef50_Q2T8N2
UniRef90 UniRef90_Q2T8N2

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 2
Synonyms
Evidence for Translation
Charge (pH 7) -9.75
Kyte-Doolittle Hydrophobicity Value -0.634
Molecular Weight (kDa) 81353.6
Isoelectric Point (pI) 6.49

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 153 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG019167 (418 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSS2093
Search term: TssI-6

References

In vivo expression technology identifies a type VI secretion system locus in Burkholderia pseudomallei that is induced upon invasion of macrophages.
Shalom G, Shaw JG, Thomas MS
Microbiology 2007 Aug;153(Pt 8):2689-2699
PubMed ID: 17660433