Burkholderia pseudomallei K96243, BPSS2068

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSS2068
Name
Replicon chromosome 2
Genomic location 2803594 - 2804364 (- strand)

Cross-References

RefSeq YP_112071.1
GI 53723086
Entrez 3096925
GI 53723086
INSDC CAH39548.1
NCBI Locus Tag BPSS2068
RefSeq YP_112071.1,GeneID
UniParc UPI000043BF2E
UniProtKB Acc Q63IK1
UniProtKB ID Q63IK1_BURPS
UniRef100 UniRef100_C4I9X7
UniRef50 UniRef50_K1ZM10
UniRef90 UniRef90_C4I9X7

Product

Feature Type CDS
Coding Frame 1
Product Name
short chain dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -6.31
Kyte-Doolittle Hydrophobicity Value -0.023
Molecular Weight (kDa) 27451.8
Isoelectric Point (pI) 4.81

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 649 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG021065 (60 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSS2068

Human Homologs

Ensembl 97, assembly GRCh38.p12
hydroxysteroid 17-beta dehydrogenase 8 [Source:HGNC Symbol;Acc:HGNC:3554]
E-value: 1.3e-17
Percent Identity: 30.2

Human Homologs

Ensembl 97, assembly GRCh38.p12
hydroxysteroid 17-beta dehydrogenase 8 [Source:HGNC Symbol;Acc:HGNC:3554]
E-value: 1.3e-17
Percent Identity: 30.2

Human Homologs

Ensembl 97, assembly GRCh38.p12
hydroxysteroid 17-beta dehydrogenase 8 [Source:HGNC Symbol;Acc:HGNC:3554]
E-value: 1.3e-17
Percent Identity: 30.2

Human Homologs

Ensembl 97, assembly GRCh38.p12
hydroxysteroid 17-beta dehydrogenase 8 [Source:HGNC Symbol;Acc:HGNC:3554]
E-value: 1.3e-17
Percent Identity: 30.2

Human Homologs

Ensembl 97, assembly GRCh38.p12
hydroxysteroid 17-beta dehydrogenase 8 [Source:HGNC Symbol;Acc:HGNC:3554]
E-value: 1.3e-17
Percent Identity: 30.2

Human Homologs

Ensembl 97, assembly GRCh38.p12
hydroxysteroid 17-beta dehydrogenase 8 [Source:HGNC Symbol;Acc:HGNC:3554]
E-value: 1.3e-17
Percent Identity: 30.2

References

No references are associated with this feature.