Burkholderia pseudomallei K96243, BPSS1552 (orgB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSS1552
Name
orgB
Synonym: sctL
Replicon chromosome 2
Genomic location 2105136 - 2105918 (+ strand)
CommentThis gene is part of the type III secretion system T3SS-3 (bsa) gene locus.

Cross-References

RefSeq YP_111558.1
GI 53722573
Entrez 3096405
GI 53722573
INSDC CAH39025.1
NCBI Locus Tag BPSS1552
RefSeq YP_111558.1,GeneID
UniParc UPI000043BD32
UniProtKB Acc Q63K14
UniProtKB ID Q63K14_BURPS
UniRef100 UniRef100_A3P719
UniRef50 UniRef50_Q2T731
UniRef90 UniRef90_A3NLF7

Product

Feature Type CDS
Coding Frame 1
Product Name
type III secretion system stator protein OrgB (T3SS-3)
Product Name Confidence: Class 2
Synonyms Type III secretion system protein
Oxygen-regulated invasion protein OrgB
Evidence for Translation
Charge (pH 7) -1.67
Kyte-Doolittle Hydrophobicity Value -0.266
Molecular Weight (kDa) 27753.7
Isoelectric Point (pI) 6.52

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Virulence Evidence

Source 1
Database VFDB : VF0428
Category T3SS-3
Evidence ECO:0000314
direct assay evidence used in manual assertion
Host Organism
Notes
Reference 17984080

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 4 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG020947 (286 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSS1552
Search term: orgB

References

Unraveling type III secretion systems in the highly versatile Burkholderia pseudomallei.
Sun GW, Gan YH
Trends Microbiol 2010 Dec;18(12):561-8
PubMed ID: 20951592
Type III Secretion in the Melioidosis Pathogen <i>Burkholderia pseudomallei</i>.
Vander Broek CW, Stevens JM
Front Cell Infect Microbiol 2017;7:255
PubMed ID: 28664152