Burkholderia pseudomallei K96243, BPSL2608

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSL2608
Name
Replicon chromosome 1
Genomic location 3128727 - 3129845 (- strand)

Cross-References

RefSeq YP_109204.1
GI 53720218
Entrez 3092683
GI 53720218
INSDC CAH36616.1
NCBI Locus Tag BPSL2608
RefSeq YP_109204.1,GeneID
UniParc UPI000043B450
UniProtKB Acc Q63RR3
UniProtKB ID Q63RR3_BURPS
UniRef100 UniRef100_Q3JPP8
UniRef50 UniRef50_Q8ZLF4
UniRef90 UniRef90_Q3JPP8

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) 2.66
Kyte-Doolittle Hydrophobicity Value -0.126
Molecular Weight (kDa) 40618.5
Isoelectric Point (pI) 8.44

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Extracellular Class 1
quantitative mass spectrometry evidence
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000806 (654 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSL2608

Human Homologs

Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 2.4e-23
Percent Identity: 31.7

Human Homologs

Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 2.4e-23
Percent Identity: 31.7

Human Homologs

Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 2.4e-23
Percent Identity: 31.7

Human Homologs

Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 2.4e-23
Percent Identity: 31.7

Human Homologs

Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 2.4e-23
Percent Identity: 31.7

References

Quantitative proteomic analysis of Burkholderia pseudomallei Bsa type III secretion system effectors using hypersecreting mutants.
Vander Broek CW, Chalmers KJ, Stevens MP, Stevens JM
Mol Cell Proteomics 2015 Apr;14(4):905-16
PubMed ID: 25635268