Burkholderia pseudomallei K96243, BPSL0078

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSL0078
Name
Replicon chromosome 1
Genomic location 88374 - 90050 (+ strand)

Cross-References

RefSeq YP_106704.1
GI 53717718
Entrez 3093552
GI 53717718
INSDC CAH34062.1
NCBI Locus Tag BPSL0078
RefSeq YP_106704.1,GeneID
UniParc UPI000043AAA1
UniProtKB Acc Q63YW1
UniProtKB ID YIDC_BURPS
UniRef100 UniRef100_A3NPX1
UniRef50 UniRef50_Q2STM0
UniRef90 UniRef90_Q2STM0

Product

Feature Type CDS
Coding Frame 1
Product Name
inner membrane protein translocase component YidC
Synonyms
Evidence for Translation
Charge (pH 7) 10.13
Kyte-Doolittle Hydrophobicity Value 0.101
Molecular Weight (kDa) 61132.3
Isoelectric Point (pI) 9.56

Subcellular localization

Individual Mappings
Localization Confidence PMID
Extracellular Class 1
quantitative mass spectrometry evidence
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 583 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG002985 (652 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSL0078

References

Quantitative proteomic analysis of Burkholderia pseudomallei Bsa type III secretion system effectors using hypersecreting mutants.
Vander Broek CW, Chalmers KJ, Stevens MP, Stevens JM
Mol Cell Proteomics 2015 Apr;14(4):905-16
PubMed ID: 25635268