Burkholderia cenocepacia J2315, BCAM2562 (gabD)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAM2562
NCBI Locus Tag	QU43_RS67270
Name	gabD
Replicon	chromosome 2
Genomic location	2907402 - 2908871 (+ strand)

Cross-References

RefSeq	WP_012493582.1
GI	206564402
Entrez	6930095
GI	206564402
INSDC	CAR56427.1
NCBI Locus Tag	QU43_RS67270
NCBI Old Locus Tag	BCAM2562
RefSeq	WP_012493582.1,GeneID
UniParc	UPI00017BA40C
UniProtKB Acc	B4EJR1
UniProtKB ID	B4EJR1_BURCJ
UniRef100	UniRef100_G7H8D1
UniRef50	UniRef50_P51650-2
UniRef90	UniRef90_A9AM18

Product

Feature Type	CDS
Coding Frame	1
Product Name	putative succinate-semialdehyde dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7)	-2.48
Kyte-Doolittle Hydrophobicity Value	0.066
Molecular Weight (kDa)	51747.9
Isoelectric Point (pI)	6.41

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 598 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG004197 (651 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAM2562 Search term: gabD Search term: putative succinate-semialdehyde dehydrogenase

Human Homologs

Ensembl 97, assembly GRCh38.p12

ENSP00000350191 aldehyde dehydrogenase 5 family member A1 [Source:HGNC Symbol;Acc:HGNC:408] E-value: 7.0e-156 Percent Identity: 58.0

References