Burkholderia cenocepacia J2315, BCAM2560

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAM2560
NCBI Locus Tag	QU43_RS67260
Name
Replicon	chromosome 2
Genomic location	2904393 - 2905901 (- strand)

Cross-References

RefSeq	WP_006491984.1
GI	206564400
Entrez	6930093
GI	206564400
INSDC	CAR56425.1
NCBI Locus Tag	QU43_RS67260
NCBI Old Locus Tag	BCAM2560
RefSeq	WP_006491984.1,GeneID
UniParc	UPI00017BA40A
UniProtKB Acc	B4EJQ9
UniProtKB ID	B4EJQ9_BURCJ
UniRef100	UniRef100_B4EJQ9
UniRef50	UniRef50_G0AEJ7
UniRef90	UniRef90_J7JD71

Product

Feature Type	CDS
Coding Frame	1
Product Name	GntR family regulatory protein
Synonyms
Evidence for Translation
Charge (pH 7)	1.06
Kyte-Doolittle Hydrophobicity Value	-0.061
Molecular Weight (kDa)	54672.8
Isoelectric Point (pI)	7.28

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 608 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG003052 (1269 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAM2560 Search term: GntR family regulatory protein

Human Homologs

Ensembl 97, assembly GRCh38.p12

ENSP00000348234 tyrosine aminotransferase [Source:HGNC Symbol;Acc:HGNC:11573] E-value: 1.4e-05 Percent Identity: 22.6

References