Burkholderia cenocepacia J2315, BCAM2390 (soxD)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAM2390
NCBI Locus Tag	QU43_RS66335
Name	soxD
Replicon	chromosome 2
Genomic location	2690503 - 2690814 (- strand)

Cross-References

RefSeq	YP_002234990.1
GI	206564227
Entrez	6930639
GI	206564227
NCBI Locus Tag	QU43_RS66335
NCBI Old Locus Tag	BCAM2390
RefSeq	YP_002234990.1
UniProtKB Acc	B4EI07
UniProtKB ID	B4EI07_BURCJ

Product

Feature Type	CDS
Coding Frame	1
Product Name	putative sarcosine oxidase subunit delta
Synonyms
Evidence for Translation
Charge (pH 7)	-1.41
Kyte-Doolittle Hydrophobicity Value	-0.823
Molecular Weight (kDa)	11687.0
Isoelectric Point (pI)	6.25

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 76 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG004063 (636 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAM2390 Search term: soxD Search term: putative sarcosine oxidase subunit delta

Human Homologs

References