Burkholderia cenocepacia J2315, BCAM0054

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAM0054
NCBI Locus Tag	QU43_RS54675
Name
Replicon	chromosome 2
Genomic location	59296 - 60099 (- strand)

Cross-References

RefSeq	WP_006482287.1
GI	206561924
Entrez	6930646
GI	206561924
INSDC	CAR53909.1
NCBI Locus Tag	QU43_RS54675
NCBI Old Locus Tag	BCAM0054
RefSeq	WP_006482287.1,GeneID
UniParc	UPI00017B9B1A
UniProtKB Acc	B4EG40
UniProtKB ID	B4EG40_BURCJ
UniRef100	UniRef100_A0A0D1DDG4
UniRef50	UniRef50_Q38ZX3
UniRef90	UniRef90_Q38ZX3

Product

Feature Type	CDS
Coding Frame	1
Product Name	putative short-chain dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7)	-0.63
Kyte-Doolittle Hydrophobicity Value	-0.084
Molecular Weight (kDa)	28987.3
Isoelectric Point (pI)	6.87

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 641 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG002810 (639 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAM0054 Search term: putative short-chain dehydrogenase

Human Homologs

Ensembl 97, assembly GRCh38.p12

ENSP00000381785 hydroxysteroid dehydrogenase like 2 [Source:HGNC Symbol;Acc:HGNC:18572] E-value: 7.2e-06 Percent Identity: 24.3

References