Burkholderia cenocepacia J2315, BCAL3443 (ispB)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAL3443
NCBI Locus Tag	QU43_RS53915
Name	ispB
Replicon	chromosome 1
Genomic location	3769936 - 3770931 (+ strand)

Cross-References

RefSeq	WP_006489248.1
GI	206561780
Entrez	6934076
GI	206561780
INSDC	CAR53766.1
NCBI Locus Tag	QU43_RS53915
NCBI Old Locus Tag	BCAL3443
RefSeq	WP_006489248.1,GeneID
UniParc	UPI00017B97D4
UniProtKB Acc	B4E5X3
UniProtKB ID	B4E5X3_BURCJ
UniRef100	UniRef100_B4E5X3
UniRef50	UniRef50_P44916
UniRef90	UniRef90_A1V0P4

Product

Feature Type	CDS
Coding Frame	1
Product Name	octaprenyl-diphosphate synthase
Synonyms
Evidence for Translation
Charge (pH 7)	-13.37
Kyte-Doolittle Hydrophobicity Value	0.003
Molecular Weight (kDa)	35652.0
Isoelectric Point (pI)	4.67

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 656 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG000468 (654 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAL3443 Search term: ispB Search term: octaprenyl-diphosphate synthase

Human Homologs

Ensembl 97, assembly GRCh38.p12

ENSP00000365388 decaprenyl diphosphate synthase subunit 1 [Source:HGNC Symbol;Acc:HGNC:17759] E-value: 2.8e-31 Percent Identity: 29.2

References