Burkholderia cenocepacia J2315, BCAL3055 (nusB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAL3055
NCBI Locus TagQU43_RS51985
Name
nusB
Replicon chromosome 1
Genomic location 3347973 - 3348410 (+ strand)

Cross-References

RefSeq WP_006476662.1
GI 206561400
Entrez 6934041
GI 206561400
INSDC CAR53377.1
NCBI Locus Tag QU43_RS51985
NCBI Old Locus Tag BCAL3055
RefSeq WP_006476662.1,GeneID
UniParc UPI000052E2DA
UniProtKB Acc B4EBT9
UniProtKB ID NUSB_BURCJ
UniRef100 UniRef100_Q1BYB7
UniRef50 UniRef50_A3MMR4
UniRef90 UniRef90_A3MMR4

Product

Feature Type CDS
Coding Frame 1
Product Name
transcription antitermination protein NusB
Synonyms
Evidence for Translation
Charge (pH 7) 0.95
Kyte-Doolittle Hydrophobicity Value -0.285
Molecular Weight (kDa) 16015.1
Isoelectric Point (pI) 7.83

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6CKQ TRANSCRIPTION 02/28/18 Solution structure of the Burkholderia thailandensis transcription antitermination protein NusB (BTH_I1529) - Seattle Structural Genomics Center for Infectious Disease target ButhA.17903.a BURKHOLDERIA THAILANDENSIS (STRAIN ATCC 700388 / DSM 13276 / CIP 106301 / E264) NOT SOLUTION NMR 91.6

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 461 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000791 (653 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL3055
Search term: nusB

Human Homologs

References

No references are associated with this feature.