Burkholderia cenocepacia J2315, BCAL1778 (mexD)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAL1778
NCBI Locus Tag	QU43_RS45430
Name	mexD
Replicon	chromosome 1
Genomic location	1961119 - 1964292 (- strand)

Cross-References

RefSeq	WP_012492632.1
GI	206560142
Entrez	6932006
GI	206560142
INSDC	CAR52078.1
NCBI Locus Tag	QU43_RS45430
NCBI Old Locus Tag	BCAL1778
RefSeq	WP_012492632.1,GeneID
UniParc	UPI00017B9419
UniProtKB Acc	B4E9W0
UniProtKB ID	B4E9W0_BURCJ
UniRef100	UniRef100_B4E9W0
UniRef50	UniRef50_B4E9W0
UniRef90	UniRef90_B4E9W0

Product

Feature Type	CDS
Coding Frame	1
Product Name	RND family efflux system transporter protein
Synonyms
Evidence for Translation
Charge (pH 7)	-3.66
Kyte-Doolittle Hydrophobicity Value	0.392
Molecular Weight (kDa)	112301.3
Isoelectric Point (pI)	6.39

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 487 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG001444 (2569 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAL1778 Search term: mexD Search term: RND family efflux system transporter protein

Human Homologs

References