Burkholderia cenocepacia J2315, BCAL0368 (cspD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAL0368
NCBI Locus TagQU43_RS38370
Name
cspD
Replicon chromosome 1
Genomic location 399947 - 400150 (- strand)

Cross-References

RefSeq WP_006477070.1
GI 206558773
Entrez 6930912
GI 206558773
INSDC CAR50678.1
NCBI Locus Tag QU43_RS38370
NCBI Old Locus Tag BCAL0368
RefSeq WP_006477070.1,GeneID
UniParc UPI000033F061
UniProtKB Acc B4E6U0
UniProtKB ID B4E6U0_BURCJ
UniRef100 UniRef100_A0A071MSX1
UniRef50 UniRef50_P42016
UniRef90 UniRef90_D5W514

Product

Feature Type CDS
Coding Frame 1
Product Name
cold shock-like protein CspD
Synonyms
Evidence for Translation
Charge (pH 7) -0.77
Kyte-Doolittle Hydrophobicity Value -0.378
Molecular Weight (kDa) 7358.3
Isoelectric Point (pI) 5.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 501 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000393 (653 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL0368
Search term: cspD

Human Homologs

References

No references are associated with this feature.