Burkholderia cenocepacia J2315, BCAL2732

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAL2732
NCBI Locus Tag	QU43_RS50275
Name
Replicon	chromosome 1
Genomic location	3000459 - 3000662 (+ strand)

Cross-References

RefSeq	WP_006488945.1
GI	206561070
Entrez	6933440
GI	206561070
INSDC	CAR53033.1
NCBI Locus Tag	QU43_RS50275
NCBI Old Locus Tag	BCAL2732
RefSeq	WP_006488945.1,GeneID
UniParc	UPI00017B982A
UniProtKB Acc	B4E905
UniProtKB ID	B4E905_BURCJ
UniRef100	UniRef100_A0A071MJV5
UniRef50	UniRef50_Q2KZH9
UniRef90	UniRef90_Q7NRW2

Product

Feature Type	CDS
Coding Frame	1
Product Name	cold shock-like protein
Synonyms
Evidence for Translation
Charge (pH 7)	0.22
Kyte-Doolittle Hydrophobicity Value	-0.173
Molecular Weight (kDa)	7208.2
Isoelectric Point (pI)	7.54

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
3CAM	GENE REGULATION	02/20/08	Crystal structure of the cold shock domain protein from Neisseria meningitidis	NEISSERIA MENINGITIDIS MC58	2.6	X-RAY DIFFRACTION	90.9

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 503 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG002386 (653 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAL2732 Search term: cold shock-like protein

Human Homologs

Ensembl 97, assembly GRCh38.p12

ENSP00000007699 Y-box binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17948] E-value: 1.3e-09 Percent Identity: 43.1

References