Burkholderia cenocepacia J2315, BCAS0471

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01845
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02321
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01845
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015562 efflux transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02321
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF02321 Outer membrane efflux protein IPR003423 Outer membrane efflux protein 75 302 1.5E-42
SUPERFAMILY SSF56954 1 516 6.67E-109
Coils Coil 237 257 -
Pfam PF02321 Outer membrane efflux protein IPR003423 Outer membrane efflux protein 332 512 9.6E-26
TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family IPR010131 RND efflux system, outer membrane lipoprotein, NodT 176 514 2.6E-96
Coils Coil 531 533 -
ProSiteProfiles PS51257 Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 6.0
MobiDBLite mobidb-lite consensus disorder prediction 40 60 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.