Burkholderia cenocepacia J2315, BCAS0099

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00356	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00356	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF53822		IPR028082	Periplasmic binding protein-like I	76	342	4.87E-55
Gene3D	G3DSA:3.40.50.2300				178	346	3.1E-62
Pfam	PF00356	Bacterial regulatory proteins, lacI family	IPR000843	LacI-type HTH domain	22	66	1.8E-14
ProSiteProfiles	PS50932	LacI-type HTH domain profile.	IPR000843	LacI-type HTH domain	20	74	27.335
Pfam	PF13377	Periplasmic binding protein-like domain			187	348	3.7E-33
SMART	SM00354		IPR000843	LacI-type HTH domain	19	89	3.4E-21
CDD	cd01392	HTH_LacI	IPR000843	LacI-type HTH domain	24	74	1.43014E-16
SUPERFAMILY	SSF47413		IPR010982	Lambda repressor-like, DNA-binding domain superfamily	22	77	3.56E-14
CDD	cd06273	PBP1_GntR_like_1			79	348	2.52305E-113
Gene3D	G3DSA:3.40.50.2300				81	341	3.1E-62
Gene3D	G3DSA:1.10.260.40				12	76	1.7E-18

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.