Burkholderia cenocepacia J2315, BCAM2692

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00346
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00346
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00346
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00346
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
ProSiteProfiles PS51077 IclR-type HTH domain profile. IPR005471 Transcription regulator IclR, N-terminal 6 68 12.614
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 2 74 2.8E-15
ProSiteProfiles PS51078 IclR effector binding domain profile. IPR014757 Transcription regulator IclR, C-terminal 69 249 21.351
Pfam PF01614 Bacterial transcriptional regulator IPR014757 Transcription regulator IclR, C-terminal 130 237 2.2E-8
SUPERFAMILY SSF46785 IPR036390 Winged helix DNA-binding domain superfamily 6 79 4.7E-13
SMART SM00346 IPR005471 Transcription regulator IclR, N-terminal 6 93 3.3E-6
Pfam PF09339 IclR helix-turn-helix domain IPR005471 Transcription regulator IclR, N-terminal 8 59 1.3E-11
Gene3D G3DSA:3.30.450.40 IPR029016 GAF-like domain superfamily 84 249 3.1E-46
SUPERFAMILY SSF55781 73 245 2.29E-25

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.