Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0015871 | choline transport |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03414
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0015871 | choline transport |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03414
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Cellular Component | GO:0042597 | periplasmic space |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03414
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Cellular Component | GO:0043190 | ATP-binding cassette (ABC) transporter complex |
Inferred from Sequence Model
Term mapped from: InterPro:PF04069
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Cellular Component | GO:0043190 | ATP-binding cassette (ABC) transporter complex |
Inferred from Sequence Model
Term mapped from: InterPro:PF04069
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0033265 | choline binding |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03414
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0022857 | transmembrane transporter activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF04069
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0022857 | transmembrane transporter activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF04069
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0055085 | transmembrane transport |
Inferred from Sequence Model
Term mapped from: InterPro:PF04069
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0055085 | transmembrane transport |
Inferred from Sequence Model
Term mapped from: InterPro:PF04069
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Cellular Component | GO:0042597 | periplasmic space |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03414
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0033265 | choline binding |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03414
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | bcj02010 | ABC transporters | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
TIGRFAM | TIGR03414 | ABC_choline_bnd: choline ABC transporter, periplasmic binding protein | IPR017783 | Choline ABC transporter, substrate-binding protein | 30 | 319 | 1.0E-127 |
Gene3D | G3DSA:3.40.190.10 | 39 | 300 | 7.0E-83 | |||
Pfam | PF04069 | Substrate binding domain of ABC-type glycine betaine transport system | IPR007210 | ABC-type glycine betaine transport system, substrate-binding domain | 38 | 290 | 5.6E-55 |
SUPERFAMILY | SSF53850 | 33 | 307 | 1.19E-77 | |||
Gene3D | G3DSA:3.40.190.100 | 120 | 229 | 7.0E-83 | |||
CDD | cd13640 | PBP2_ChoX | IPR017783 | Choline ABC transporter, substrate-binding protein | 38 | 303 | 2.18807E-147 |