Burkholderia cenocepacia J2315, BCAM2054 (bcscD)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0005515 | protein binding |
Inferred from Sequence Model
Term mapped from: InterPro:SSF49879
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| TIGRFAM | TIGR02500 | type_III_yscD: type III secretion apparatus protein, YscD/HrpQ family | IPR012843 | Type III secretion system YscD/HrpQ | 122 | 395 | 8.0E-53 |
| Pfam | PF16537 | Type II secretion system protein B | IPR032389 | Type II secretion system protein B | 344 | 394 | 1.3E-7 |
| Pfam | PF16697 | Inner membrane component of T3SS, cytoplasmic domain | IPR032030 | YscD, cytoplasmic domain | 36 | 127 | 8.2E-11 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 399 | 447 | - | ||
| Gene3D | G3DSA:2.60.200.20 | 29 | 149 | 3.4E-12 | |||
| SUPERFAMILY | SSF49879 | IPR008984 | SMAD/FHA domain superfamily | 27 | 124 | 1.02E-7 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.