Burkholderia cenocepacia J2315, BCAM1434

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46689
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS01124
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS01124
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS01124
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.880 IPR029062 Class I glutamine amidotransferase-like 1 199 3.4E-51
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 208 255 3.94E-8
SUPERFAMILY SSF52317 IPR029062 Class I glutamine amidotransferase-like 1 191 8.71E-43
SMART SM00342 IPR018060 DNA binding HTH domain, AraC-type 225 308 5.6E-22
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 261 311 8.06E-8
Pfam PF12833 Helix-turn-helix domain IPR018060 DNA binding HTH domain, AraC-type 231 309 1.2E-18
ProSiteProfiles PS01124 Bacterial regulatory proteins, araC family DNA-binding domain profile. IPR018060 DNA binding HTH domain, AraC-type 212 310 24.581
Pfam PF01965 DJ-1/PfpI family IPR002818 DJ-1/PfpI 67 170 1.1E-15
Gene3D G3DSA:1.10.10.60 208 317 3.5E-26
CDD cd03137 GATase1_AraC_1 4 188 1.20423E-70

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.