Burkholderia cenocepacia J2315, BCAM1349

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009297 pilus assembly
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
Biological Process GO:1900192 positive regulation of single-species biofilm formation
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
Biological Process GO:2001008 positive regulation of cellulose biosynthetic process
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00419
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00419
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 144 217 1.4E-17
ProSiteProfiles PS51063 Crp-type HTH domain profile. IPR012318 Crp-type HTH domain 146 212 9.047
SUPERFAMILY SSF46785 IPR036390 Winged helix DNA-binding domain superfamily 147 222 1.15E-17
SMART SM00419 IPR012318 Crp-type HTH domain 162 210 6.9E-6
Pfam PF13545 Crp-like helix-turn-helix domain IPR012318 Crp-type HTH domain 151 216 2.6E-15
CDD cd00038 CAP_ED IPR000595 Cyclic nucleotide-binding domain 13 126 9.34768E-7
SUPERFAMILY SSF51206 IPR018490 Cyclic nucleotide-binding-like 11 134 4.97E-8

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.