Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0008134 | transcription factor binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF00158
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0005524 | ATP binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF00158
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:SSF46689
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0043565 | sequence-specific DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF02954
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF00158
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
PRINTS | PR01590 | FIS bacterial regulatory protein HTH signature | IPR002197 | DNA binding HTH domain, Fis-type | 434 | 454 | 4.6E-7 |
CDD | cd00009 | AAA | 172 | 323 | 5.13721E-21 | ||
ProSitePatterns | PS00688 | Sigma-54 interaction domain C-terminal part signature. | IPR025944 | Sigma-54 interaction domain, conserved site | 366 | 375 | - |
Pfam | PF00158 | Sigma-54 interaction domain | IPR002078 | RNA polymerase sigma factor 54 interaction domain | 153 | 319 | 1.8E-65 |
ProSitePatterns | PS00676 | Sigma-54 interaction domain ATP-binding region B signature. | IPR025943 | Sigma-54 interaction domain, ATP-binding site 2 | 239 | 254 | - |
Gene3D | G3DSA:1.10.10.60 | 403 | 455 | 1.7E-12 | |||
SMART | SM00382 | IPR003593 | AAA+ ATPase domain | 173 | 316 | 2.2E-11 | |
Pfam | PF02954 | Bacterial regulatory protein, Fis family | IPR002197 | DNA binding HTH domain, Fis-type | 412 | 451 | 4.1E-10 |
SUPERFAMILY | SSF52540 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | 152 | 395 | 1.06E-68 | |
ProSiteProfiles | PS50045 | Sigma-54 interaction domain profile. | IPR002078 | RNA polymerase sigma factor 54 interaction domain | 153 | 382 | 62.072 |
Gene3D | G3DSA:3.40.50.300 | 139 | 323 | 1.9E-61 | |||
PRINTS | PR01590 | FIS bacterial regulatory protein HTH signature | IPR002197 | DNA binding HTH domain, Fis-type | 417 | 434 | 4.6E-7 |
SUPERFAMILY | SSF46689 | IPR009057 | Homeobox-like domain superfamily | 366 | 453 | 2.47E-11 | |
Gene3D | G3DSA:1.10.8.60 | 324 | 402 | 1.1E-23 |