Burkholderia cenocepacia J2315, BCAM1339
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0044010 | single-species biofilm formation | Inferred from Genomic Context | ECO:0000177 genomic context evidence |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF13229 | Right handed beta helix region | IPR039448 | Right handed beta helix domain | 136 | 259 | 5.5E-13 |
| SUPERFAMILY | SSF51126 | IPR011050 | Pectin lyase fold/virulence factor | 76 | 358 | 1.68E-38 | |
| SMART | SM00710 | IPR006626 | Parallel beta-helix repeat | 172 | 194 | 560.0 | |
| SMART | SM00710 | IPR006626 | Parallel beta-helix repeat | 282 | 317 | 480.0 | |
| SMART | SM00710 | IPR006626 | Parallel beta-helix repeat | 322 | 344 | 180.0 | |
| SMART | SM00710 | IPR006626 | Parallel beta-helix repeat | 346 | 377 | 7300.0 | |
| SMART | SM00710 | IPR006626 | Parallel beta-helix repeat | 149 | 171 | 7.4 | |
| SMART | SM00710 | IPR006626 | Parallel beta-helix repeat | 226 | 249 | 50.0 | |
| SMART | SM00710 | IPR006626 | Parallel beta-helix repeat | 196 | 218 | 1600.0 | |
| Gene3D | G3DSA:2.160.20.10 | IPR012334 | Pectin lyase fold | 53 | 369 | 2.1E-27 | |
| SMART | SM00710 | IPR006626 | Parallel beta-helix repeat | 250 | 273 | 8.2 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.