Burkholderia cenocepacia J2315, BCAM0728

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0005524	ATP binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00158	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003700	DNA-binding transcription factor activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PIRSF037354	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00158	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0008134	transcription factor binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00158	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Coils	Coil				538	538	-
CDD	cd00009	AAA			201	354	7.45418E-19
SUPERFAMILY	SSF52540		IPR027417	P-loop containing nucleoside triphosphate hydrolase	189	434	4.19E-51
SMART	SM00382		IPR003593	AAA+ ATPase domain	208	354	2.8E-11
Gene3D	G3DSA:3.40.50.300				173	361	2.0E-49
ProSiteProfiles	PS50045	Sigma-54 interaction domain profile.	IPR002078	RNA polymerase sigma factor 54 interaction domain	187	425	45.781
Gene3D	G3DSA:1.10.8.60				362	445	9.8E-7
Pfam	PF06956	Regulator of RNA terminal phosphate cyclase	IPR009715	Regulator of RNA terminal phosphate cyclase	2	186	4.1E-84
PIRSF	PIRSF037354		IPR017183	Sigma54-dependent transcriptional activator, RtcR	1	533	2.8E-281
Pfam	PF00158	Sigma-54 interaction domain	IPR002078	RNA polymerase sigma factor 54 interaction domain	189	355	4.3E-50

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.